BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C02LP1|AL427279
(692 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1425 1364 0.0
>3x_Contig1425
Length = 7919
Score = 1364 bits (688), Expect = 0.0
Identities = 691/692 (99%)
Strand = Plus / Minus
Query: 1 ccattctctccaatgagtattcgtataatcacataaatcaaaaagaatcatttttaaaag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 3636 ccattctctccaatgagtattcgtattatcacataaatcaaaaagaatcatttttaaaag 3577
Query: 61 ggtaatgtggttgtaaaaccatgaaaccgacctattgatgaagactctgtaattttccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3576 ggtaatgtggttgtaaaaccatgaaaccgacctattgatgaagactctgtaattttccat 3517
Query: 121 ttctttgattgcatgcaacaatgtataattgtggaaacctctcttatctttcgacttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3516 ttctttgattgcatgcaacaatgtataattgtggaaacctctcttatctttcgacttgtc 3457
Query: 181 tctccaaaactcaaataatgcaaataaggctttccgtctttgccaagttctcttagattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3456 tctccaaaactcaaataatgcaaataaggctttccgtctttgccaagttctcttagattc 3397
Query: 241 tcttagctttagacctaaacttaccaatctattctcccaacggaattccatcaggaaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3396 tcttagctttagacctaaacttaccaatctattctcccaacggaattccatcaggaaata 3337
Query: 301 ttctaatgaattgacgtatctctcggttaatatgacattggacaaaacttgacaagccat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3336 ttctaatgaattgacgtatctctcggttaatatgacattggacaaaacttgacaagccat 3277
Query: 361 tgaggtttcaatctcaacgtctggtttaaggaaatacgcgttgattctatcctgtcttgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3276 tgaggtttcaatctcaacgtctggtttaaggaaatacgcgttgattctatcctgtcttgt 3217
Query: 421 taactcggcgtaatcttcttcatgcattgttaatttaatcaattcgtcttctttgtgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3216 taactcggcgtaatcttcttcatgcattgttaatttaatcaattcgtcttctttgtgtct 3157
Query: 481 gaacttcaaatccaaatactctcccgctgtgattggaattgtagaaccttttctataaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3156 gaacttcaaatccaaatactctcccgctgtgattggaattgtagaaccttttctataaaa 3097
Query: 541 aaaaccttcacggcagtaaagttccacaggggatgacattaacaaagacgctgcattttc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3096 aaaaccttcacggcagtaaagttccacaggggatgacattaacaaagacgctgcattttc 3037
Query: 601 ttgggattgattgttagagcttggtcttccccttttatctttcttttctggtaacatcgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3036 ttgggattgattgttagagcttggtcttccccttttatctttcttttctggtaacatcgg 2977
Query: 661 aatcatcctgctcatctttcgacgatcatgca 692
||||||||||||||||||||||||||||||||
Sbjct: 2976 aatcatcctgctcatctttcgacgatcatgca 2945
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6182
Number of Sequences: 1807
Number of extensions: 6182
Number of successful extensions: 163
Number of sequences better than 1.0e-20: 1
length of query: 692
length of database: 10,358,551
effective HSP length: 16
effective length of query: 676
effective length of database: 10,329,639
effective search space: 6982835964
effective search space used: 6982835964
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)